PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010929149.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 514aa    MW: 53013 Da    PI: 6.8755
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010929149.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.5e-12296341555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  XP_010929149.1 296 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 341
                     99***********************8.....6******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.2E-17289350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.28E-13289345No hitNo description
PROSITE profilePS5088817.39291340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-16293350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-9296341IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-13297346IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    Send to blast
MQQSSREMQG MASSLNGIPS SAGVAAAAAQ IALQELHNGH RQQQIQNPSM QVPAAHFDHS  60
TAGSEAGSHD DFFDQMLSSL PSSWPDLGNP KVPWDLTSSS NPNGLAGKSP EESATAAAEG  120
LQYAPYDESL LLASRLRQHQ ISGGSSPAGK QMLLQLNHPH QQQQQQQMLL QGMGRSPVAT  180
SGGDSGLLPM PLSLGSAGSA DSRLLVDRSR DELDPSFRSN PTGGEGLYNG FGGSLQGGAQ  240
AAPQQHFHHP QGPSMPAQNF GGAPSAGVGQ AGAAGGGTAP PRQRVRARRG QATDPHSIAE  300
RLRRERIAER MKALQELVPN ANKTDKASML DEIIDYVKFL QLQVKVLSMS RLGGAAAVAP  360
VVSDMPSERL AVQGQSGRSG INGAAGNDSL TVTEHQVAKL MEEDMGSAMQ YLQGKGLCLM  420
PISLASAISS ATCHPRPVAG NGGGIHHLNP GCLIPAPPPS NHNNPAVGSG AGGGGDGPSS  480
PSMSVLTVQS AMANGGDTDV SRTSVKDAAS VSKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1300305RLRRER
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00659PBMTransfer from Pp3c14_15890Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010929149.10.0PREDICTED: uncharacterized protein LOC105050721 isoform X1
SwissprotQ9ZUG91e-80BH066_ARATH; Transcription factor bHLH66
TrEMBLM0SBT11e-165M0SBT1_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P04630_0011e-164(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141937118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.18e-64LJRHL1-like 1